This page is part of the HL7 Terminology (v1.0.0: Release) based on FHIR R4. The current version which supercedes this version is 5.2.0. For a full list of available versions, see the Directory of published versions

sequenceStatus - JSON Representation

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{
  "resourceType" : "CodeSystem",
  "id" : "variant-state",
  "meta" : {
    "lastUpdated" : "2020-04-09T21:10:28.568+00:00"
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n            \n      <h2>sequenceStatus</h2>\n            \n      <div>\n              \n        <p>Codes providing the status of the variant test result.</p>\n\n            \n      </div>\n            \n      <p>This code system http://terminology.hl7.org/CodeSystem/variant-state defines the following codes:</p>\n            \n      <table class=\"codes\">\n              \n        <tr>\n                \n          <td style=\"white-space:nowrap\">\n                  \n            <b>Code</b>\n                \n          </td>\n                \n          <td>\n                  \n            <b>Display</b>\n                \n          </td>\n                \n          <td>\n                  \n            <b>Definition</b>\n                \n          </td>\n              \n        </tr>\n              \n        <tr>\n                \n          <td style=\"white-space:nowrap\">positive\n                  \n            <a name=\"variant-state-positive\"> </a>\n                \n          </td>\n                \n          <td>positive</td>\n                \n          <td>the variant is detected.</td>\n              \n        </tr>\n              \n        <tr>\n                \n          <td style=\"white-space:nowrap\">negative\n                  \n            <a name=\"variant-state-negative\"> </a>\n                \n          </td>\n                \n          <td>negative</td>\n                \n          <td>no variant is detected.</td>\n              \n        </tr>\n              \n        <tr>\n                \n          <td style=\"white-space:nowrap\">absent\n                  \n            <a name=\"variant-state-absent\"> </a>\n                \n          </td>\n                \n          <td>absent</td>\n                \n          <td>result of the variant is missing.</td>\n              \n        </tr>\n            \n      </table>\n          \n    </div>"
  },
  "url" : "http://terminology.hl7.org/CodeSystem/variant-state",
  "identifier" : [
    {
      "system" : "urn:ietf:rfc:3986",
      "value" : "urn:oid:2.16.840.1.113883.4.642.1.1085"
    }
  ],
  "version" : "4.2.1",
  "name" : "SequenceStatus",
  "title" : "sequenceStatus",
  "status" : "draft",
  "experimental" : false,
  "date" : "2020-04-09T21:10:28+00:00",
  "publisher" : "HL7 (FHIR Project)",
  "contact" : [
    {
      "telecom" : [
        {
          "system" : "url",
          "value" : "http://hl7.org/fhir"
        },
        {
          "system" : "email",
          "value" : "fhir@lists.hl7.org"
        }
      ]
    }
  ],
  "description" : "Codes providing the status of the variant test result.",
  "caseSensitive" : true,
  "valueSet" : "http://terminology.hl7.org/ValueSet/variant-state",
  "content" : "complete",
  "concept" : [
    {
      "code" : "positive",
      "display" : "positive",
      "definition" : "the variant is detected."
    },
    {
      "code" : "negative",
      "display" : "negative",
      "definition" : "no variant is detected."
    },
    {
      "code" : "absent",
      "display" : "absent",
      "definition" : "result of the variant is missing."
    }
  ]
}